Proteomics using Bioinformatics tools 2008

 

Schedule

Location: please check everyday the course location at the Biozentrum (BZ) & Pharmazentrum (PZ), Basel

Time

Room

Topic

Teacher

Mo Jan. 28

DAY 1

 

9:30-10:00

104 (BZ)

Coffee & Registration


10:00
10:15
- 12:30

104 (BZ)

Welcome Address
Theory

General Introduction to Mass Spectrometry

L. Bordoli
PA. Binz

12:30-14:00

Lunch break

 

14:00 - 17:30 (with coffee break)

104 (BZ)

Theory:
Protein identification and quantitation workflows (introduction overview of experimental approaches, data analysis processes, use of sequence databases)

PA. Binz

18:30-...

Social Dinner [pdf]

 

Tu Jan. 29

DAY 2

 

9:00-12:30(with coffee break)


105 (BZ) and then
Lab (PZ)

Laboratory: 
Analysis of the phospo-proteome of Yeast

P.Jenö & Course Staff

12:30-14:00

Lunch break

 

14:00-17:30
(with coffee break)

Lab (PZ)

Laboratory: 
Analysis of the phospo-proteome of Yeast

P.Jenö & Course Staff

We Jan. 30

DAY 3

 

9:00-12:30(with coffee break)

Lab (PZ)

Laboratory: 
Analysis of the phospo-proteome of Yeast

P.Jenö & Course Staff

12:30-14:00

Lunch break

 

14:00-17:30(with coffee break)

Lab (PZ)

Laboratory: 
Analysis of the phospo-proteome of Yeast

P.Jenö & Course Staff

Th Jan. 31

DAY 4

 

9:00-10:30

HS2 (PZ)

Theory: 
Mass spectrometry data analysis using Bioinformatics tools

P. Palagi

10:30-10:45

Coffee break

 

10:45-12:30

HS2 (PZ)

Theory:
Mass spectrometry data analysis using Bioinformatics tools

P. Palagi

12:30-14:00

Lunch break

 

14:00-17:30
(with coffee break)

105 (BZ)

Practical exercises

P. Palagi

Fr Feb. 1

Day 5

 

9:00-10:00

102 (BZ)

Course Examination

10:00-10:30

Coffee Break

10:30-12:30

102 (BZ)

Wrap up and Question & Answer session

Course Staff

12:30-13:30

Lunch break

 

13:30-15:30

102 (BZ)

Exam correction, time to finish exercises

Course Staff

15:30-16:00

Course feed-back & Coffee